BINF G4001 Introduction to Computer Applications
in Health Care & Biomedicine
COURSE DESCRIPTION: An overview of the field of biomedical informatics, combining perspectives from medicine, computer science and social science. Use of computers and information in health care and the biomedical sciences, covering specific applications and general methods, current issues, capabilities and limitations of biomedical informatics. Biomedical Informatics studies the organization of medical information, the effective management of information using computer technology, and the impact of such technology on medical research, education, and patient care. The field explores techniques for assessing current information practices, determining the information needs of health care providers and patients, developing interventions using computer technology, and evaluating the impact of those interventions. BINF G4001 must be taken fall term of entry.
Instructor
Nicholas Tatonetti, PhD
Class Schedule
Classes are taught on Mondays and Wednesdays in the fall semester.
Course is taught on main (Morningside) campus.
Class Syllabus
Lecture | Title | Lecturer | Reading | Assignments |
---|---|---|---|---|
1 | Clinical Information Systems | David Vawdrey | Chapter 5, Chapter 6 | |
2 | Translational Bionformatics | Nicholas Tatonetti | Chaper 25 | |
3 | Secondary Use of EHR Data | George Hripcsak | Chapter 1 | |
4 | Human Computer Interaction | Lena Mamykina | JBI-Pratt-2004 | |
5 | Cognitive Informatics | Vimla Patel | Chapter 4 | |
6 | DB Management | Karthik Natarajan | Chapter 2 | Midterm Topic Due |
7 | Health Informatics Standards | Virginia Lorenzi | TBA | |
8 | Machine Learning | Adler Perotte | Optional HW 1 Assigned | |
9 | Applications: Phenotyping | Noemie Elhadad | ||
10 | Healthcare IT Policy and Politics | David Liss | Chapter 27 | |
11 | PH informatics | Rita Kukafka | Midterm Outline Due | |
12 | Clinical Research Informatics | Chunhua Weng | Chapter 26 | Optional HW 2 Assigned |
13 | CDS | Herbert Chase | Chapter 22 | |
14 | Basic Biology + Bio DB | Richard Friedman | Chapter 24 | Bio HW exercise assigned |
15 | Functional Genomics | Tuuli Lappalainen | Albert & Kruglyak 2015 | Optional HW 3 Assigned |
16 | Systems Biology | Andrea Califano | ||
17 | Microbiome Analysis | Tal Korem | Bio HW exercise due | |
18 | OHDSI | Patrick Ryan | ||
19 | Natural Language Processing | Carol Friedman | Chapter 8 | Midterm Paper Due |
20 | Cancer genomics/ Topological data | Raul Rabadan | Optional HW 4 Assigned | |
21 | Quality and patient safety | Rimma Perotte | ||
22 | Health Care Process Modeling | Sarah Rossetti | ||
23 | Future of Informatics | Ter Shortliffe | Chapter 28 | |
24 | Final Exam |